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Registro Completo |
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Biblioteca(s): |
Embrapa Suínos e Aves. |
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Data corrente: |
14/10/2015 |
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Data da última atualização: |
18/02/2016 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
GAVA, D.; SOUZA, C. K.; SCHAEFER, R.; VINCENT, A. L.; CANTAO, M. E.; COLDEBELLA, A.; ZANELLA, J. R. C. |
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Afiliação: |
DANIELLE GAVA, CNPSA; CARINE KUNZLER DE SOUZA, UFRGS; REJANE SCHAEFER, CNPSA; AMY LOUISE VINCENT, USDA/ARS; MAURICIO EGIDIO CANTAO, CNPSA; ARLEI COLDEBELLA, CNPSA; JANICE REIS CIACCI ZANELLA, CNPSA. |
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Título: |
A TaqMan-based real-time PCR for detection and quantification of porcine parvovirus 4. |
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Ano de publicação: |
2015 |
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Fonte/Imprenta: |
Journal of Virological Methods, v. 219, p. 14-17, 2015. |
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DOI: |
http://dx.doi.org/10.1016/j.jviromet.2015.03.011 |
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Idioma: |
Inglês |
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Conteúdo: |
Porcine parvovirus 4 (PPV4) is a DNA virus, and a member of the Parvoviridae family within the Bocavirus genera. It was detected recently in swine, but its epidemiology and pathology remain unclear. A TaqManbased real-time PCR (qPCR) targeting a conserved region of the ORF3 gene of PPV4 was developed. The qPCR detection limit was 9.5 × 101 DNA copies/L. There was no cross-reaction with porcine parvovirus, torque teno virus 1, torque teno virus 2, porcine circovirus type 1, porcine circovirus type 2, or with pseudorabies virus. Two hundred and seventy-two samples, including serum, semen, lungs, feces, ovarian follicular fluids, ovaries and uterus, were evaluated by qPCR and PPV4 was detected in 36 samples (13.2%). When compared with a conventional PCR (cPCR), the qPCR assay was 10 times more sensitive and the detection of PPV4 DNA in field samples was increased 2.5 times. Partial sequencing of PPV4 ORF3 gene, obtained from two pooled samples of uterus and ovaries, revealed a high nucleotide identity (98?99%) with a reference PPV4 sequence. The qPCR can be used as a fast and accurate assay for the detection and quantification of PPV4 in field samples and for epidemiological studies in swine herds. |
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Palavras-Chave: |
Porcine parvovirus; Swine disease. |
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Thesagro: |
Doença animal; Parvovirose; Suíno; Virologia. |
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Thesaurus Nal: |
Parvoviridae; Quantitative polymerase chain reaction; SsDNA viruses; Virology. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02164naa a2200325 a 4500
001 2026395
005 2016-02-18
008 2015 bl uuuu u00u1 u #d
024 7 $ahttp://dx.doi.org/10.1016/j.jviromet.2015.03.011$2DOI
100 1 $aGAVA, D.
245 $aA TaqMan-based real-time PCR for detection and quantification of porcine parvovirus 4.$h[electronic resource]
260 $c2015
520 $aPorcine parvovirus 4 (PPV4) is a DNA virus, and a member of the Parvoviridae family within the Bocavirus genera. It was detected recently in swine, but its epidemiology and pathology remain unclear. A TaqManbased real-time PCR (qPCR) targeting a conserved region of the ORF3 gene of PPV4 was developed. The qPCR detection limit was 9.5 × 101 DNA copies/L. There was no cross-reaction with porcine parvovirus, torque teno virus 1, torque teno virus 2, porcine circovirus type 1, porcine circovirus type 2, or with pseudorabies virus. Two hundred and seventy-two samples, including serum, semen, lungs, feces, ovarian follicular fluids, ovaries and uterus, were evaluated by qPCR and PPV4 was detected in 36 samples (13.2%). When compared with a conventional PCR (cPCR), the qPCR assay was 10 times more sensitive and the detection of PPV4 DNA in field samples was increased 2.5 times. Partial sequencing of PPV4 ORF3 gene, obtained from two pooled samples of uterus and ovaries, revealed a high nucleotide identity (98?99%) with a reference PPV4 sequence. The qPCR can be used as a fast and accurate assay for the detection and quantification of PPV4 in field samples and for epidemiological studies in swine herds.
650 $aParvoviridae
650 $aQuantitative polymerase chain reaction
650 $aSsDNA viruses
650 $aVirology
650 $aDoença animal
650 $aParvovirose
650 $aSuíno
650 $aVirologia
653 $aPorcine parvovirus
653 $aSwine disease
700 1 $aSOUZA, C. K.
700 1 $aSCHAEFER, R.
700 1 $aVINCENT, A. L.
700 1 $aCANTAO, M. E.
700 1 $aCOLDEBELLA, A.
700 1 $aZANELLA, J. R. C.
773 $tJournal of Virological Methods$gv. 219, p. 14-17, 2015.
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| 6. |  | VALARINI, P. J.; ALVAREZ, M. C. D.; GASCÓ, J. M.; GUERRERO, F.; TOKESHI, H. Assessment of soil properties by organic matter and em-microorganism incorporation. Revista Brasileira de Ciência do Solo, Viçosa, v. 27, n. 1, p. 519-525, 2003.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: Nacional - A |
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